PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024968044.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 162aa MW: 17654.6 Da PI: 9.1638

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024968044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	107.7	6e-34	79	132	4	57
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57 lkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrn Pv k XP_024968044.1 79 PGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNAPVEKEVTK 132 5689********************************************876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MVFSPVTPFQ DHHDCHQQLQ QSNHQQESGG VGENLNFWQP LAPPQHGGGG GGGGGGEGSI 60 QLGSMVDQAR LANPPLREPG LKCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA 120 LRNAPVEKEV TKAAETRNLR SRKGAKSISG SPSRCSTENI AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	1e-36	Dof family protein