PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968114.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 149aa    MW: 16602 Da    PI: 10.3726
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00137395123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++Cg  F     L  H+r+H
  XP_024968114.1 73 HECSICGLEFELGQALGGHMRRH 95
                    78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MKRNWENDRE IENLAMANCL TLLNRVGQSG SGRVFHCKTC NKQFSTFQAL GGHRTSHKRP  60
KSTDETPAKA KTHECSICGL EFELGQALGG HMRRHRDALA EKSVRTKVAV TVVEEVDGGR  120
RGLCLDLNLT PFQNKVKIWR RSGTAAIAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.14e-36C2H2 family protein