PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968177.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 441aa    MW: 48469.3 Da    PI: 7.8324
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.41.6e-24194249359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     DgynWrKYGqK+vk+ e +rsYY+Ct+ +C +kk +e +++ ++v++i+Y+g+H+h+
  XP_024968177.1 194 DGYNWRKYGQKQVKSPEGSRSYYKCTYIECDAKK-IESCDQFNSVTKIVYKGQHKHD 249
                     9*******************************98.*********************7 PP
2WRKY93.31.8e-29338395259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      Dgy+WrKYGqK+vkg+++pr+YY+CtsagC v+k++e++ +  + v itY+g H+h+
  XP_024968177.1 338 ADGYRWRKYGQKMVKGNPHPRNYYKCTSAGCLVRKHIEKAVDGASGVMITYKGVHDHD 395
                     6****************************************99**************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MDDDSDRSSE ETQLEENSTA EDANNLDDDD AEDSAGVDEN TDDQRDVSPL EISHVSAEED  60
LRTCRSLTLV SGLSEVPVKY EMRRDELEHL KNQLQGSHQE ALATVIAQAA QAHSESQLKL  120
PGVLSSSIGL SSMPVTSILS LPSVPVLSSL QCSNSQGQIV SLVVNADSIH VAEANQKDAT  180
GTDPKPLPVK IPMDGYNWRK YGQKQVKSPE GSRSYYKCTY IECDAKKIES CDQFNSVTKI  240
VYKGQHKHDP PKKVSSRGGK ILSTPKSPKR KSISTPGLKD HRSSGSVGCV PIQVEQVDEP  300
QQKQRVKKSS SENPGSVLKH PKKPKFIVHA AGDVEISADG YRWRKYGQKM VKGNPHPRNY  360
YKCTSAGCLV RKHIEKAVDG ASGVMITYKG VHDHDMPVPK KRQPPPTHLL NAKRSESTTE  420
TAKTSETTRT LLSVGFEIKN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.15e-82WRKY family protein