PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968433.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 222aa    MW: 25633.6 Da    PI: 9.5657
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.26.4e-11103146151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV++ k + +W A I++      +k+++lg+  + eeAa+++++a+ 
  XP_024968433.1 103 CVMRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVSSQEEAARLYDRAAF 146
                     568***96.5.7*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MVSIRRQRLI KLYGRSPFLD FLSPYENGQS PGNWMQSTRL AGMHPSPPVD FDQPDEQENT  60
KSEEPEPSIV NESSSSNKQP VPHPEFKRRK RHRRKNFENQ EACVMRGVYY KNMKWQAAIK  120
VDKKQIHLGT VSSQEEAARL YDRAAFMCGR EPNFELTIEQ KAELSKLSWD EFLTMTRTAI  180
NSKKNQRRVS SRMKFEHQQQ NNSDSERGNG YSGSDDADAS AA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-44ERF family protein