PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024968575.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 373aa MW: 41967.4 Da PI: 7.9412

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024968575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.6	1e-06	243	281	17	55
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 A+rsR RK+++i+eLe+ v++L+ae ++ e+e l+++ XP_024968575.1 243 AQRSRVRKLQYIAELEKNVQALQAEGSEVSAEVEFLNQQ 281 89************************9999999988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MANSKGPSTM RSMMYNGKHS LLPPKSPFPS IAPSYADYVS NSAIGPKGPP KYRDGNSLHQ 60 RTSSESFLIE EQPSWLDDLL NEPETPVRRG HRRSSSDSFT YMEAANAANN EYRAQDEYRL 120 RNLSSALSWG SQDFDIFTDS RNPSFYAEPN AMMKNKNRAW DSSQNALTHS IGSASPRDNF 180 VLQNSISLAA SREVDGNTSI ATEKKDAIES LRQDADTSER KDSSSNKASA SETDTKRAKQ 240 QFAQRSRVRK LQYIAELEKN VQALQAEGSE VSAEVEFLNQ QSLILSMENK ALKQRLETLA 300 QEQLIKYMEH EVLEREIGRL RALYQQQQQP QQPPTAPRHR RTTSMDKLDS RFADLSLKKD 360 SGSSHDVSGP LHT

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MANSKGPSTM RSMMYNGKHS LLPPKSPFPS IAPSYADYVS NSAIGPKGPP KYRDGNSLHQ  60
RTSSESFLIE EQPSWLDDLL NEPETPVRRG HRRSSSDSFT YMEAANAANN EYRAQDEYRL  120
RNLSSALSWG SQDFDIFTDS RNPSFYAEPN AMMKNKNRAW DSSQNALTHS IGSASPRDNF  180
VLQNSISLAA SREVDGNTSI ATEKKDAIES LRQDADTSER KDSSSNKASA SETDTKRAKQ  240
QFAQRSRVRK LQYIAELEKN VQALQAEGSE VSAEVEFLNQ QSLILSMENK ALKQRLETLA  300
QEQLIKYMEH EVLEREIGRL RALYQQQQQP QQPPTAPRHR RTTSMDKLDS RFADLSLKKD  360
SGSSHDVSGP LHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	1e-100	bZIP family protein