PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968697.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 173aa    MW: 20147.7 Da    PI: 8.6256
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000113658123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C+k +++   L  H+++H
  XP_024968697.1 36 FMCNFCNKEYKSAQALGGHMNVH 58
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MDHKLKSKWE SNKLMIYDEK EMYGYQGVVP WPQRNFMCNF CNKEYKSAQA LGGHMNVHRR  60
DRARLRLSSP PSLDPNPNPN FYPSSSPIHY LPYKTYYHSS LLSTTNPQDH DNQEPFSSAR  120
DFLGNLRKNV TTEDGDQEEI RVSKKGEIFN TKMEMGLLKD GKDLDLELRL GRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.12e-13C2H2 family protein