PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968720.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 148aa    MW: 16292.8 Da    PI: 6.8095
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51e-202677256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp   + + +r++lg++ taeeAa+a+++a+  ++g+
  XP_024968720.1 26 KYRGVRRRP-WGKFAAEIRDP---NrQGTRVWLGTYATAEEAARAYDRAAFDMRGH 77
                    8********.**********9...5445*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MNRGGASRGN HNDSRTTGGP TEEVIKYRGV RRRPWGKFAA EIRDPNRQGT RVWLGTYATA  60
EEAARAYDRA AFDMRGHMAV LNFPSEYPPT FSAAAYNASS AMSAASSAAE SSSGSTTAAH  120
GREVFEFEYL DDQLLEDLLD YDNNKTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-22ERF family protein