PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024968724.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 214aa    MW: 23738.3 Da    PI: 4.8062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024968724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-2079129255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng   r++lg+f++aeeAa a+++a+ +++g
  XP_024968724.1  79 SYRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEEAAMAYDEAAFSMRG 129
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDASVALHRS SDDSRKSPWS PEDDLLFRQD SLPFNSNDSE DMLLFDILAA DLADQSSESN  60
SSTIADEVSS QSKPVNHKSY RGVRRRPWGK FAAEIRDSTR NGVRVWLGTF DSAEEAAMAY  120
DEAAFSMRGS LAVLNFPVER VKESLKKMKY GFEEGSSPVV VLKKRHSQRC KREEKVVAGD  180
GDGEKVTMVL EDLGADYLDQ LLSSSETGKN TSMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.18e-51ERF family protein