PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969024.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 220aa    MW: 24973.8 Da    PI: 4.7099
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969024.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1980129355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +l+g
  XP_024969024.1  80 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFALRG 129
                     9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDYSPETCFS SPEYSSPAIQ FDYSHYSDHH FLPFNENDSQ DMLLFGLISD STGEPEAKTK  60
THSSFPANYQ VKEQEEWISY RGVRRRPWGK YAAEIRDSTR NGVRVWLGTF DTAEAAALAY  120
DQAAFALRGS TAVLNFTEEV AYESLKEMGY SYEEGSSPVL ALKRMHSVKR RFEMKNKKRV  180
ETKVESVVVL EDLGSDYLEQ LLGFEELGGN CMQTSVYGLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-52ERF family protein