PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969283.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 344aa    MW: 38239.3 Da    PI: 4.7483
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.5e-20108158256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++ge
  XP_024969283.1 108 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRGE 158
                     69*******.**********954...4**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MCGGAILSDI IAPTANRSRR LTADLLWNTD LIKNPSKHFS KPPRSDVYDI DDEFEADFQG  60
FKDQVEIDED NKPFAFSASK NFAPARGSRS VKSDDQAERS TSRKRKNQYR GIRQRPWGKW  120
AAEIRDPRKG VRVWLGTFNT AEEAARAYDA EARRIRGEKA KVNFPDKATP AKPKSQKPTP  180
KVSPTSNQTT KNQYSGSLGF VEEKPQSNLV VATEDMAVKP FGSSESAAFY FSSDQGSNSF  240
DCSDFPWGDN CARTPEITSV LSEVDEASFM EDGNPAKKPK MESVNVVSDC DKSDQLFFEM  300
PYLEGNWDAS SMDAFLNGDA TQDGGNVMDL WSFDDLPAMM NGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.37e-76ERF family protein