PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024969451.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 416aa MW: 45707.2 Da PI: 8.2201

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024969451.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.9	1.9e-37	107	165	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+l+cprCds+ntkfCyynn +++qPr+fCk+C+ryWt+GG++rn+PvG+grrk+k+ XP_024969451.1 107 PDKILPCPRCDSMNTKFCYYNNSNINQPRHFCKSCQRYWTAGGTMRNMPVGAGRRKKKN 165 7899*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MNDPGIILFG KKIGLPETAK ITNLPPSHGG TRERACSSIY THPQTSFTPH VCDEGRKDEA 60 NPDDELELDD NPKTPSLNEE GQPEKPQTTT GTEGDTANSQ PKTLKKPDKI LPCPRCDSMN 120 TKFCYYNNSN INQPRHFCKS CQRYWTAGGT MRNMPVGAGR RKKKNPPSHC RFIISQEAFG 180 SSAAAPQIEF AADSDGVHNT VHPPKVLSFS PNTPHAGANL SVASARVREN GDDCSSGSTV 240 ITSNSLVEKI QDNPGFHSQV HWIPGASWSY NPWNTAIPLP IPAICPPGYP PMPIYPSPYW 300 NSVPWLHPAT SATNFSILGK HSTDREETKP NEEPKRHKNS VLIPKTLRID DPDEAAKSSI 360 WATLGIKKEN NSRGDLFKAF QAKGDEKKKH PTTEPSPVLQ ANPAAFSRSL CFQERA

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MNDPGIILFG KKIGLPETAK ITNLPPSHGG TRERACSSIY THPQTSFTPH VCDEGRKDEA  60
NPDDELELDD NPKTPSLNEE GQPEKPQTTT GTEGDTANSQ PKTLKKPDKI LPCPRCDSMN  120
TKFCYYNNSN INQPRHFCKS CQRYWTAGGT MRNMPVGAGR RKKKNPPSHC RFIISQEAFG  180
SSAAAPQIEF AADSDGVHNT VHPPKVLSFS PNTPHAGANL SVASARVREN GDDCSSGSTV  240
ITSNSLVEKI QDNPGFHSQV HWIPGASWSY NPWNTAIPLP IPAICPPGYP PMPIYPSPYW  300
NSVPWLHPAT SATNFSILGK HSTDREETKP NEEPKRHKNS VLIPKTLRID DPDEAAKSSI  360
WATLGIKKEN NSRGDLFKAF QAKGDEKKKH PTTEPSPVLQ ANPAAFSRSL CFQERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	6e-74	Dof family protein