PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024969452.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 414aa MW: 45504.9 Da PI: 8.2707

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024969452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.9	1.9e-37	105	163	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+l+cprCds+ntkfCyynn +++qPr+fCk+C+ryWt+GG++rn+PvG+grrk+k+ XP_024969452.1 105 PDKILPCPRCDSMNTKFCYYNNSNINQPRHFCKSCQRYWTAGGTMRNMPVGAGRRKKKN 163 7899*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MNDPGIILFG KKIGLPETAK ITNLPPSHGG TRERACSSIY THPQTSFTPH DEGRKDEANP 60 DDELELDDNP KTPSLNEEGQ PEKPQTTTGT EGDTANSQPK TLKKPDKILP CPRCDSMNTK 120 FCYYNNSNIN QPRHFCKSCQ RYWTAGGTMR NMPVGAGRRK KKNPPSHCRF IISQEAFGSS 180 AAAPQIEFAA DSDGVHNTVH PPKVLSFSPN TPHAGANLSV ASARVRENGD DCSSGSTVIT 240 SNSLVEKIQD NPGFHSQVHW IPGASWSYNP WNTAIPLPIP AICPPGYPPM PIYPSPYWNS 300 VPWLHPATSA TNFSILGKHS TDREETKPNE EPKRHKNSVL IPKTLRIDDP DEAAKSSIWA 360 TLGIKKENNS RGDLFKAFQA KGDEKKKHPT TEPSPVLQAN PAAFSRSLCF QERA

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MNDPGIILFG KKIGLPETAK ITNLPPSHGG TRERACSSIY THPQTSFTPH DEGRKDEANP  60
DDELELDDNP KTPSLNEEGQ PEKPQTTTGT EGDTANSQPK TLKKPDKILP CPRCDSMNTK  120
FCYYNNSNIN QPRHFCKSCQ RYWTAGGTMR NMPVGAGRRK KKNPPSHCRF IISQEAFGSS  180
AAAPQIEFAA DSDGVHNTVH PPKVLSFSPN TPHAGANLSV ASARVRENGD DCSSGSTVIT  240
SNSLVEKIQD NPGFHSQVHW IPGASWSYNP WNTAIPLPIP AICPPGYPPM PIYPSPYWNS  300
VPWLHPATSA TNFSILGKHS TDREETKPNE EPKRHKNSVL IPKTLRIDDP DEAAKSSIWA  360
TLGIKKENNS RGDLFKAFQA KGDEKKKHPT TEPSPVLQAN PAAFSRSLCF QERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	6e-74	Dof family protein