PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969539.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 353aa    MW: 40369.9 Da    PI: 7.6119
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.2e-1168108340
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 
                     ++k +rr+++NReAAr+sR+RKka++++Le    k ++Le+
  XP_024969539.1  68 SDKLQRRLAQNREAARKSRLRKKAYVQQLESgrlKLAQLEQ 108
                     589**************************974334555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MTSTSTQFAT SRRMGIYDPL QQISMWEEAF GASLSPNTSP NMVISQTEYN SQESLGPSLD  60
NRATKNISDK LQRRLAQNRE AARKSRLRKK AYVQQLESGR LKLAQLEQEL ERARRQGVYG  120
GLLNTGNGLL SGIAAFEMEY DLWVAEQQKK DDELRKVLLT HMSDIELRIF VDSGLNHYYE  180
LFRMKADAAK ADVFYLMNGL WRTPVERFFQ WIGGFRPSEL LYILTPQIEL LTDAQLVNVT  240
SLRQSCEQAE EALSQGMDKL QQTLAQSITI DITGAGSYNS QMTCAMERLE ALEIFLNQAD  300
HLRQQTLQQM YRLLTTRQAA RVLLALGEYF QRLRVLSSLW SARPHDHSTT LLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.11e-143bZIP family protein