PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969830.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 225aa    MW: 25308.8 Da    PI: 6.6528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1983132255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa a+++a+++++g
  XP_024969830.1  83 HYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAAIAYDEAALRFKG 132
                     7********.**********7.....337************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MHNYHRKRSV RAEEEEDEDD VFPVYSSQSQ DDMTAMVSAL SEVIGTDDTH HHPHPTIIPN  60
QPPLNIQHSP PAAEGNQRGR QRHYRGVRQR PWGKWAAEIR DPHKAARVWL GTFETAEAAA  120
IAYDEAALRF KGNKAKLNFP ERVQPGRSEL GYLTTRPHHP PPPQSQPPYH ATMPPDYSQF  180
LLGAANDMGY NPNILQSSSS SSTNLQGSSS GFGSMQYWQD FDPNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.17e-37ERF family protein