PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024969855.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 215aa    MW: 23184.8 Da    PI: 5.6602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024969855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-184898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_024969855.1 48 PVYRGVRLRR-WGKWVSEIRQPRQ---KSRIWLGTFSTPEMAARAHDVAALSIKG 98
                    68*****998.**********943...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MAPLMASSSS SATATATATA GSTQSDSSVL QPRSCKRSRH SNPEDHFPVY RGVRLRRWGK  60
WVSEIRQPRQ KSRIWLGTFS TPEMAARAHD VAALSIKGNS AILNFPHLKD SLPRPASVSP  120
RDVQEAAAKA ATMQQFSSFS SESLGQPPSS DVSMLSPAAD SSVSSNPVDD QLGEIIELPS  180
LDGFFESSSN ELIVETVDGW MYPSWVVAET DGFPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-52ERF family protein