PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024969974.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 427aa MW: 45964.8 Da PI: 10.2994

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024969974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	6.7e-14	348	398	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v eL+++N++Lk + + ++ XP_024969974.1 348 RRQRRMIKNRESAARSRARKQAYTMELEAEVSELKQKNQELKRKQADMMEM 398 79***************************************9776555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MNLKNFGNQA MEMDSTSGRP PGNFPLARQG SIYSLTFDEL QNTMGSIGKD FGSMNMDELL 60 KNIWNAEEMQ TMGFNTSTSV QDRGGVGGTN LQRQGSLTLP RTLSQKTVDQ VWKDLSKENS 120 NSFGQPNLPQ RQQTLGEMTL EEFLVKAGVV REETHLAGKP NDNGLFSNLT NNPGFGAIGF 180 QPAVGQNASV DVMRSRIPDP DGGSNQISFQ SANLPLNGNG VRSAQNQQQP LFPKQTNLPY 240 GAPMGLMNSN HLGSPVIRNG VVGLSDPLMN GNLVSAATLQ GGIGGMVGLG GGGGGGGEVT 300 VAAGSPPVSS DGIGKSNGDT SSVSPAPCVF NGVMRGRKGS AIEKVVERRQ RRMIKNRESA 360 ARSRARKQAY TMELEAEVSE LKQKNQELKR KQADMMEMQK NQQVMEMMNM QPGTKRQRLR 420 KTVSGPW

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MNLKNFGNQA MEMDSTSGRP PGNFPLARQG SIYSLTFDEL QNTMGSIGKD FGSMNMDELL  60
KNIWNAEEMQ TMGFNTSTSV QDRGGVGGTN LQRQGSLTLP RTLSQKTVDQ VWKDLSKENS  120
NSFGQPNLPQ RQQTLGEMTL EEFLVKAGVV REETHLAGKP NDNGLFSNLT NNPGFGAIGF  180
QPAVGQNASV DVMRSRIPDP DGGSNQISFQ SANLPLNGNG VRSAQNQQQP LFPKQTNLPY  240
GAPMGLMNSN HLGSPVIRNG VVGLSDPLMN GNLVSAATLQ GGIGGMVGLG GGGGGGGEVT  300
VAAGSPPVSS DGIGKSNGDT SSVSPAPCVF NGVMRGRKGS AIEKVVERRQ RRMIKNRESA  360
ARSRARKQAY TMELEAEVSE LKQKNQELKR KQADMMEMQK NQQVMEMMNM QPGTKRQRLR  420
KTVSGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-119	bZIP family protein