PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024970015.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 235aa    MW: 26129.7 Da    PI: 7.979
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024970015.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20112146135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_024970015.1 112 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 146
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MNRCNGSNMM GPCSCGLYHY QPPNSFSTIF SMPYEQEEYV SPSSVDCTLS LGTPSTRLTN  60
DYEKTHPHDQ RSSWWNILQS SSKSPAPQST HKANRGGGNG SATADSLFSR RCANCDTTST  120
PLWRNGPRGP KSLCNACGIR FKKEERRANA AAAAVVTSGG SDATEGYHHH QYMMNGNQWV  180
NHHSQPNHKM PSCYSPAAAA NEYRFMDDVD DRDSPFLSWR LNVTDRPGLV HDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-52GATA family protein