PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024970069.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GATA
Protein Properties Length: 252aa    MW: 27848 Da    PI: 5.8072
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024970069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.72.4e-16168205136
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                     C++Cgt +  Tp++Rrgp g++tLCnaCGl+++ +g++
  XP_024970069.1 168 CAHCGTCSmdTPMMRRGPAGPRTLCNACGLFWANRGTM 205
                     **********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MYGKSSMSEF GEIPPEEVPS HPGGVRNGVD SMDDRNVSYG LEDVDGGSDG ICDFEGIDGV  60
VYSDLAIMPR GDAGDQLTLS YCGQVYVFDN VTTDKVQKVF LHLGGCEFPV GQQGAESAYQ  120
NPRDLDYPGR CSDPRRAASL SRFRQKRKER CFEKKIRYNV RQEVARRCAH CGTCSMDTPM  180
MRRGPAGPRT LCNACGLFWA NRGTMRDLSK KSNDQSSSLA EQVYKCKDEY NGSNFGTTMP  240
RCSNDAELGF GN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.31e-51GATA family protein