PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024970416.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 150aa MW: 17239.3 Da PI: 6.2594

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024970416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.1	8.9e-14	23	82	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 l++ +r+q+NRe+ArrsR RK++ ++ L++ + ++++ N++ +++ +++ ++++e+ XP_024970416.1 23 LRKRKRMQSNRESARRSRVRKQKHLDDLTDQINQMKKDNTQILTTIDVTTQQFVQVEAEN 82 6789***************************************99999988887777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
MASSSGNSSQ IHHSGSEEDL VGLRKRKRMQ SNRESARRSR VRKQKHLDDL TDQINQMKKD 60 NTQILTTIDV TTQQFVQVEA ENSVIRAQMG ELSQRLDYLN EIINLINCSS STTTAPGLFE 120 FEQPDFMNNP WNLMYLNQQP IMASAEMLQY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	45	RKRKRMQSNRESARRSRVRKQK
2	37	43	RRSRVRK
3	37	44	RRSRVRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	9e-45	bZIP family protein