PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024970744.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 224aa    MW: 25498.5 Da    PI: 6.9198
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024970744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.32.4e-303691359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    ++rY eClkNhA+ +G +avDGC+Efm++ g egt +alkCaAC+CHRnFHR+e+e+
  XP_024970744.1 36 GFRYLECLKNHAVGIGKQAVDGCREFMAA-GGEGTLEALKCAACNCHRNFHRKEPEH 91
                    589*************************9.8899*******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEFHRHTEDD DEEEEEDDEE TGIQRTSGRM NGGIAGFRYL ECLKNHAVGI GKQAVDGCRE  60
FMAAGGEGTL EALKCAACNC HRNFHRKEPE HPQASFQHHQ IPPPATYYYH HRPVGYLHVT  120
TPSSSHPHRP PLALPSTSRD NLEEISNPNS EGSKKRFRTK FTESQKERML SFAEGLGWRI  180
QKEEEAAVRQ FCEEIGIKRK VLKVWMHNNK HTLGVTVSLI QGVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-63ZF-HD family protein