PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024970926.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 219aa    MW: 24123 Da    PI: 8.2082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024970926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.12.9e-2099149255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_024970926.1  99 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAIAYDRAAYRMRG 149
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MMQAEASAFP ATNIGDLPAF CRTASFSSLM PCLSENWGDL PLKVDDSEDM VIYAFLHDAL  60
RTGWTPFNFS AKEIKPESME PSDPQVEETA ANSAPKGKHY RGVRQRPWGK FAAEIRDPAK  120
NGARVWLGTY ETAEEAAIAY DRAAYRMRGS KALLNFPHRI GLNEPEPVRV TSKRRSPEPS  180
TSLSSNSESG SPKRRNTKGS AGEVVEPEVQ SRSSTSINK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-52ERF family protein