PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024971055.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 214aa MW: 23414.8 Da PI: 9.2088

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024971055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.9e-39	20	78	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l qPr+fCk+CrryWtkGG+lrn+PvGgg+rk +k+ XP_024971055.1 20 NEHLNCPRCDSSNTKFCYYNNYNLLQPRHFCKNCRRYWTKGGTLRNIPVGGGTRKINKR 78 6889***************************************************7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MHHQPFSSQI MSMNPQFPEN EHLNCPRCDS SNTKFCYYNN YNLLQPRHFC KNCRRYWTKG 60 GTLRNIPVGG GTRKINKRSP ISSKRPADSS PPTSPATTPP PPSASGESET ERSGIFSYGN 120 NQRKLDGGSF NLMMRSNHRM QYGSFVDGLR SNLGGGSEED GLIGTPASDV YQKKHLSLND 180 EGGSGGGREE SSGWNGGGNG WPNLSIFTPG SNLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-39	Dof family protein