PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971161.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bZIP
Protein Properties Length: 328aa    MW: 36394 Da    PI: 8.9855
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-104184245
                    XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                    ++ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  XP_024971161.1 41 RDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQEL 84
                    567899*************************9888888777655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MAELSPRTDT STDGDTEDKA LGFHSSQSHG LVVSDASDKS RDQKTLRRLA QNREAARKSR  60
LRKKAYVQQL ESSRMKLTQL EQELQRARQQ GIFISSSGEQ SQSMSGNGAL AFDVEYGRWL  120
EEHNRRINEL KGAVSNHAGD GELRIIVDGV VAHYEDIFRI KGDAAKADVF HVLSGMWKTP  180
AERCFLWLGG FRSSELLKLL ITQLEPLTEQ QLLAIGNLQQ SSQQAEDALS QGMEALQQSL  240
AETIAGSLGS SNSSGNVASY MGQMAMAMGK LGTLEGFIRQ ADNLRQQTLQ QMHRILTTRQ  300
SARALIAIND YSSRLRALSS LWLARPRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.11e-132bZIP family protein