PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971409.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 206aa    MW: 23001.6 Da    PI: 4.5358
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-182373155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  XP_024971409.1 23 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 73
                    59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MVKKEQEIQT ESWKTSSSMI SKKKYKGVRM RSWGSWVSEI RAPNQKTRIW LGSYSTAEAA  60
ARAYDAALLC LKGPTANLNF SHTQYNHDYS TPIMSPKSIQ KIAAAAATVT DTVPSPSYSS  120
SLSSSASTPP PTNPIEDEET LFSANDPLDG TLMSMVAPWY NFDSPTYNDV MLDTSFFEFD  180
HSCSTTMEDV YEEEGGDDIY LWSFCR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-29ERF family protein