PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971579.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family EIL
Protein Properties Length: 626aa    MW: 70762.2 Da    PI: 5.3284
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3505.92e-154474311354
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     +el++rmw+d+mll+rlk+++k     ke  ++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipe+gkpv+gasd+LraWW
  XP_024971579.1  47 DELERRMWRDRMLLRRLKDQNKG----KE--VDNAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVSGASDNLRAWW 135
                     79******************998....55..59999*********************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fdrngpaai+kyqa++ i+++++++  +  s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww++lgl+k++
  XP_024971579.1 136 KEKVRFDRNGPAAIAKYQADHSISGRNEDN-CAVVSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGDEEWWSQLGLPKEH 229
                     ***********************9987777.669************************************************************* PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXXXXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkqspkvtlsceqke 282
                     gtppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee + ++++++s    s+  +  ++ +s+ +++
  XP_024971579.1 230 GTPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEETLSRKLYPDSCppiSSAGGTGSYLISDTSDY 324
                     *************************************************************************444467777************* PP

                     XXXXXXXXX.XXXXXXXXXX...................................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXX CS
            EIN3 283 dvegkkeskikhvqavktta...................................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgseteli 342
                     dv+g ++ ++ + +++k +                                      ++v+krk++++e++ ++ ++ + tc+  q+++s+ +++
  XP_024971579.1 325 DVDGVEDDQTVELEECKPQPrdvnnlysmglmgpadrlmvpqlaqvkgelidvpsPDNFVQKRKQPSDEQQPAMMEQKIFTCEFPQCPYSDIRVG 419
                     ***8888887888888887789*******************************997799*****9**999999999999**************** PP

                     XXXXXXXXXXXX CS
            EIN3 343 fadknsisqney 354
                     f+d+ s++++++
  XP_024971579.1 420 FQDRFSRNNHQM 431
                     **********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    
MGIFEEMGFY GNLDFLSASQ CEGERPHETE QEAPGEEDYS DEEMDVDELE RRMWRDRMLL  60
RRLKDQNKGK EVDNAKQRQS QEQARRKKMS RAQDGILKYM LKMMEVCKAQ GFVYGIIPEN  120
GKPVSGASDN LRAWWKEKVR FDRNGPAAIA KYQADHSISG RNEDNCAVVS TPHTLQELQD  180
TTLGSLLSAL MQHCDPPQRR FPLEKGVAPP WWPTGDEEWW SQLGLPKEHG TPPYKKPHDL  240
KKAWKVGVLT AVIKHMSPDI AKIRKLVRQS KCLQDKMTAK ESATWLAIIN QEETLSRKLY  300
PDSCPPISSA GGTGSYLISD TSDYDVDGVE DDQTVELEEC KPQPRDVNNL YSMGLMGPAD  360
RLMVPQLAQV KGELIDVPSP DNFVQKRKQP SDEQQPAMME QKIFTCEFPQ CPYSDIRVGF  420
QDRFSRNNHQ MSCPYRSTPN PNHNPSRGGT LNFQMNNHIQ KEPVFTIPAF AQPKITTAPP  480
VNQDSAPSYG GLNSQLGLPG DGQRAISDLM SFYDTKHQQT NRSLNSGNLD VIGDHQNQKQ  540
KFPIQLDDFF GHGVETNIPS NQSTFLPPGF QFDNKTPYNS GFDANNLNTN ENNLDFRFVS  600
QSPFTLGGVD FSGDPNPNAD INMWYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.10.0EIL family protein