PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024971592.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 307aa MW: 34266.4 Da PI: 8.2462

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024971592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.5	3.3e-14	219	275	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevak 58 + +r+rr++kNRe+A rsR+RK+a+++eLe + +Le+eN++L k ++e+ +k +++ XP_024971592.1 219 AQQRQRRMIKNRESAARSRERKQAYQAELESLAVKLEEENETLlKAKAEQTRKRYKQ 275 679**************************************9725578888777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MASSKLMMKM SSSTSRNSDL IRRKSSNSSS SSSSTNHHHH HKHPSIRINN NSGVFDMTVD 60 GLLPTVHNNN EQQAPESTLL DAEITLLDAA GAVTAINDTD TPAAVSRQER VRTSSNGGQK 120 TVDDVWKEIV AGRSCKQEVP DEMMTLEDFL AKAGAVEEED VKIPPPPLPS ERLSGGIFSF 180 DNPIHPPNVD GVVGFGIGVD EMGGRGKRRA ILEPLDKAAQ QRQRRMIKNR ESAARSRERK 240 QAYQAELESL AVKLEEENET LLKAKAEQTR KRYKQVIQAC QDEFANAYRY NVFLYVPFER 300 TFLRRAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	9e-49	bZIP family protein