PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971630.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 190aa    MW: 21104.6 Da    PI: 6.9362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971630.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.9e-20555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr+++ +g+WvAeIr+p        +r++lg+f taeeAa+a+++a+  + g
  XP_024971630.1  5 KKFRGVRQRH-WGSWVAEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 55
                    59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MVQTKKFRGV RQRHWGSWVA EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT  60
NFPVVKAQTS GDTSDATATA TTTTTTTSPP SSTGLSAILS AKLRKCCKSP SPSLTCLRLD  120
TESSHIGVWQ KRAGVHSESN WVMTVELGKN NYNNSNNNER EIDREPEVET PIDEEDAIAL  180
QMIEELLNTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-66ERF family protein