PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971645.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family NF-YB
Protein Properties Length: 155aa    MW: 17201.6 Da    PI: 4.3596
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB74.31.9e-231193385
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
                    ++d+ lP a +++i+k++lP + ++++d+++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf dy+e++ +
  XP_024971645.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCVEFINLISSESNEVCSREDKRTIAPEHVLKALEVLGFGDYIEEVYA 93
                    6899***************************************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MEPMDIVGKT KEDASLPKAT MTKIIKEMLP PDVRVARDTQ DLLIECCVEF INLISSESNE  60
VCSREDKRTI APEHVLKALE VLGFGDYIEE VYAAYEQHKL ETVDTVRGGK CTNGAEMTEE  120
EALAEQQRMF AEARARMNGV ATAPKPPEAE PSLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-90NF-YB family protein