PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971734.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 231aa    MW: 25752.7 Da    PI: 7.7028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971734.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.81.5e-1692137555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  XP_024971734.1  92 HNLSEKRRRSRINEKLKALQTLVPNS-----NKTDKASMLDEAIEYLKQLQ 137
                     9************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MADLYGTNND RSFSSSSSLE SEDMSFFLQS FLNNSSTKGN SFYGTETNQV NFPPRHDVAG  60
FDLGCEVQKQ SEGRQNSNPP RSSKRARAAE IHNLSEKRRR SRINEKLKAL QTLVPNSNKT  120
DKASMLDEAI EYLKQLQLKV QTLTMRNGLG LQQPIYSQQE EMEMEMGANP SQGGFSIDIG  180
NGHMPSLSHM MKQDNVFGSQ VNQYHHVFTN HSTSIKEIGC LNGKIPSPGV S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-25bHLH family protein