PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971745.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 223aa    MW: 25446.2 Da    PI: 5.6036
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-28145203159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYG+K+vk+s++ r+YY+C+s+gC+vkk+ver+++d ++++ tY g Hnhe
  XP_024971745.1 145 LDDGYRWRKYGKKKVKSSPNLRNYYKCSSTGCEVKKRVERDKDDSSYLIATYIGMHNHE 203
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MDASLPPTSL PPSQDLNSSS SSSLNFPFSS FNDDPIYRLF DFDHTLYYIH NPNPNPNPNP  60
PLFIDLPSYQ DSSSSSFPAY VSMKEQSSVL LDLTTANNTA ESSHISIDDT CMPQPDSFHR  120
DEFNRERVPD ETKISFRVKT ALEVLDDGYR WRKYGKKKVK SSPNLRNYYK CSSTGCEVKK  180
RVERDKDDSS YLIATYIGMH NHEIPSLIPC NTRPTEVWTL QLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.15e-32WRKY family protein