PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024971820.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ZF-HD
Protein Properties Length: 87aa    MW: 9421.63 Da    PI: 8.7107
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024971820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer95.54.3e-302176359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                    +v+Y +ClkNhAas+G +avDGC+Efm+s g egt  al CaACgCHRnFHRr+v+e
  XP_024971820.1 21 TVHYGQCLKNHAASIGRYAVDGCREFMAS-GGEGTRGALSCAACGCHRNFHRRDVDE 76
                    799*************************9.8899*******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MKKQQVVIKK NKTSSPSVIR TVHYGQCLKN HAASIGRYAV DGCREFMASG GEGTRGALSC  60
AACGCHRNFH RRDVDEVACE CSSTSDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.14e-31ZF-HD family protein