PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024971821.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 259aa MW: 29132.1 Da PI: 4.1037

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024971821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.7	1.1e-37	26	81	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++s XP_024971821.1 26 PNCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRS 81 58***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MFDQMMLHYP QRPLENRWKP SVEIAPNCPR CASPNTKFCY YNNYSLSQPR YFCKGCRRYW 60 TKGGSLRNVP VGGGCRKNRR SRPARSSQTG GGGSLGYLNN PSCSGDSANE SPERSNIDLA 120 DVFAKFLNQN SDQADLEIVG EDSSSGIGIE MPVCDSTEEV ELQNMVIQDP FMGDDNEIEE 180 FMVQNTNLLE LHDILNEELP QEISWSDETT TLSSFTWQQD FEPFICNNDD LNISADVVTD 240 NWSPATLDLP SVGNFFPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	1e-44	Dof family protein