PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972012.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 244aa    MW: 27282.2 Da    PI: 8.6538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972012.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39e-193887255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                     ykGVr++  +g+Wv+eIr+p   + r  r++lg+f +a eAa a++aa+++l+g
  XP_024972012.1 38 TYKGVRQRT-WGKWVSEIREP---N-RgSRVWLGTFNSAREAAIAYDAAARRLYG 87
                    69****999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MLNVGNNGGG GRRRTTAQAS SRKGCMRGKG GPENASCTYK GVRQRTWGKW VSEIREPNRG  60
SRVWLGTFNS AREAAIAYDA AARRLYGPNA HVNLPDEAHD SAPPPPPAVT EAAKEARYHR  120
ALEQMKKQQE FERQIQIYMH QQNQNQKIKV ENMEISDLNG QTVANYHHFQ NHKINHDPRN  180
GENYVDPKSS TGNLNANLPE FDDSRLWTEA ASTMDYQSQA IDPGIAASTF NDTIGIELNH  240
PLMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.18e-38ERF family protein