PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972091.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 213aa    MW: 23111.8 Da    PI: 10.1016
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.6e-2097147256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr ++ +grW AeIrd       r r++lg+f+ta+eAa+a++aa+++++g+
  XP_024972091.1  97 RYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAQEAARAYDAAARRMRGA 147
                     8********.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MELPSETMSA GLFHDQSSSK SQILENQSLF DQNLETPSPE AVVSPENNRR GVLEGIAAVV  60
GEHVLFGNSM ATAGDDNEES KDKPVKSGGD GGGVEKRYRG VRKRPWGRWS AEIRDRIGRC  120
RHWLGTFDTA QEAARAYDAA ARRMRGANAR TNFEIPSVFP IPATLPTSSP SSESKKRKAG  180
GENKCNAVTS VAQLFSNTGR KTMKITGVTR SSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-30ERF family protein