PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972116.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 224aa    MW: 24322.6 Da    PI: 5.7653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-184797155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + ++GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_024972116.1 47 PVFRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 97
                    579****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAPSSSPSPS CSPPPSTAAE HKVAPPETAM QTKMKKRNRK DVSYKHPVFR GVRMRSWGKW  60
VSEIRQPRKK SRIWLGTFPT PEMAARAHDV AALSIKGTSA ILNFPQLKDS LPRPASLSPR  120
DVQEAAAKAA TMQDLPASGT PVPPLRPSSG DGCCSPVDEL GEIIELPNLE GYLDSPESPT  180
ELVMVDSVDR WMQPSWAVAD IDGFLDYISD QVAEDGGGSL IWDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-59ERF family protein