PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972669.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 160aa    MW: 17681.4 Da    PI: 8.2592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71e-163078355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_024972669.1 30 YRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 78
                    9*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MESPATAAAA PCSSNTKEEI IHHTQNAKTY RGIRMRKWGK WVAEIREPNK RSRIWLGSYS  60
SPVAAARAYD TAVFYLRGPT ARLNFPDSIG DDGDLHDLSS ASIRKKATEV GAKVDALQNQ  120
NGGINHHHNH QSPSSERHSG RVCLNTDLNE YPSPESSDEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.11e-49ERF family protein