PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972693.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 191aa    MW: 21832.4 Da    PI: 4.3801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.2e-1754102354
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                     y+GVr  +++g+++AeIrd + ng   r++lg+f+taeeAa a+++a+   +
  XP_024972693.1  54 YRGVR-PRRWGKYAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFVTR 102
                     9***9.556**********44465..*********************97655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDSSFFPYYT SNQSLPFNEN DSEEMVLFGM LAESSYNEDL SNQTMSSPAN NISYRGVRPR  60
RWGKYAAEIR DSTRNGVRVW LGTFDTAEEA ALAYDQAAFV TRGSMAVLNF PVETVYESLQ  120
AMDYMMDIEE GTSPVLALKR CHTMRRKAVI REKKRKEMKL DDESKEVVVF EDLGADYLEE  180
ILSLSESSCS W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-49ERF family protein