PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024972704.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 190aa    MW: 21340.8 Da    PI: 4.6275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024972704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-1854103355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+++AeIrd + ng   r++lg+f+taeeAa a+++a+ + +g
  XP_024972704.1  54 YRGVRARS-WGKYAAEIRDSTRNG--VRVWLGTFDTAEEAALAYDQAAFAARG 103
                     9****888.**********44465..**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MASSFFANTP NQYLPFNEND SQEMVLFGML AESSYGDEDS SHQTTSIPAD KISYRGVRAR  60
SWGKYAAEIR DSTRNGVRVW LGTFDTAEEA ALAYDQAAFA ARGSMAVLNF PVETVYESLQ  120
AMDYRFEEGS SPVLALKRSH SMRRKAVIKE KKRKEMKLAD DYNKDVLVLE DLGADYLEEI  180
LSLSESSGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-48ERF family protein