PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973146.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 223aa MW: 24453.9 Da PI: 8.9097

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.1	5.2e-40	23	82	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++lkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG+lrn+P+Ggg+rkn k+ XP_024973146.1 23 QQEHLKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPIGGGTRKNTKR 82 57899****************************************************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MQRDDSSTYS TSTMNMNPKF PDQQEHLKCP RCDSINTKFC YYNNYNLSQP RHFCKNCRRY 60 WTKGGTLRNI PIGGGTRKNT KRSLNSNKRG GAHSSSSSST SPAVLAPPVA QPKPEVSGMY 120 GRYGDDRMDG GGGSFSSLLG SPPGGQFAKL LMDGLSPNLV DGSVEDGLIR NPSAEEFESN 180 FLRMNHKTSN QIEGAGGGES SYYNQRDNGW PDLSIYTPGS NFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	6e-38	Dof family protein