PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973233.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 240aa MW: 26566.1 Da PI: 7.2037

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.2	1.8e-38	30	89	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWt+GG lrnvPvGgg rk k+s XP_024973233.1 30 HHQDLKCPRCDSSNTKFCYYNNYNLSQPRHFCKSCRRYWTNGGVLRNVPVGGGIRKAKRS 89 56889****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MQDIHSIESS GGGGRLFAAG GGDRRLRPHH HQDLKCPRCD SSNTKFCYYN NYNLSQPRHF 60 CKSCRRYWTN GGVLRNVPVG GGIRKAKRSG KPKSKTSVPS SAVAADPSDL EHKSSNSENS 120 SSGSCSRTAN TTATATPMTT AEVSGSNSTN STPPMLLNFN ESSTRFLNVA DPPILKQSSE 180 IVTFGSLMSS WTDELPQGIQ KTENEMQRDW EENEGLFDQS YWSQNQWNDD DDHHLLNYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	1e-35	Dof family protein