PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973277.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 428aa MW: 46109.4 Da PI: 10.0047

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.1	5.2e-15	350	400	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L+++N++Lk ++e+++ + XP_024973277.1 350 RRQRRMIKNRESAARSRARKQAYTMELEAEVSKLKEQNQELKRKAEMMEMQ 400 79****************************************999987754 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MNFKNYGNQP PAAEVGGGGS GRPPGNFNLA RQGSIYSLTF DELQTTMGSI GKDFGSMNMD 60 ELLKSIWNAE EVQTTVNTTT NGGQDGGGGG GGGGDGGANI QRQGSLTLPR TISQKTVDEV 120 WKDISKEFSN GFGQPHLPQR QQTLGEMTLE EFLVKAGVVR EEPQLDSKSN DNDLFSSLTN 180 SQNNSSFGAI GFQPAASRNV NRIPENSSNQ IAFQSTNLPL SVNGVRSTQQ HPQQNHQQQL 240 FQKQPNLSYG APMASKQMGS PVIRNGIMGL SDSSMNGNLV SSGMLQGGMG GMVGLGATGG 300 VTVAVGSPVF SSDGIGKTNG DTSSVSPAPY EFSGVVRGRK SGTVEKVVER RQRRMIKNRE 360 SAARSRARKQ AYTMELEAEV SKLKEQNQEL KRKAEMMEMQ QNQQVMEMMN TQPGAKRRCL 420 RRTQSGPW

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MNFKNYGNQP PAAEVGGGGS GRPPGNFNLA RQGSIYSLTF DELQTTMGSI GKDFGSMNMD  60
ELLKSIWNAE EVQTTVNTTT NGGQDGGGGG GGGGDGGANI QRQGSLTLPR TISQKTVDEV  120
WKDISKEFSN GFGQPHLPQR QQTLGEMTLE EFLVKAGVVR EEPQLDSKSN DNDLFSSLTN  180
SQNNSSFGAI GFQPAASRNV NRIPENSSNQ IAFQSTNLPL SVNGVRSTQQ HPQQNHQQQL  240
FQKQPNLSYG APMASKQMGS PVIRNGIMGL SDSSMNGNLV SSGMLQGGMG GMVGLGATGG  300
VTVAVGSPVF SSDGIGKTNG DTSSVSPAPY EFSGVVRGRK SGTVEKVVER RQRRMIKNRE  360
SAARSRARKQ AYTMELEAEV SKLKEQNQEL KRKAEMMEMQ QNQQVMEMMN TQPGAKRRCL  420
RRTQSGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-100	bZIP family protein