PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024973293.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 236aa    MW: 26948.7 Da    PI: 9.69
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024973293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67.2e-16132220197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v+   +l lp +f++++  k  ++ t+tl de+g+++   +    ++ +  l++GW++F  ++gL +gD +vF+  +++ + ++v 
  XP_024973293.1 132 FVKPMLQSHVTGGFWLGLPGHFCRKNLPK--KDGTVTLIDEEGEEFPTVY--LAHKAG--LSGGWRGFSISHGLVDGDALVFQ--QTKPTVFKVY 218
                     89**********************99544..3449***************..666655..9**********************..4455545666 PP

                     EE CS
              B3  96 vf 97 
                     ++
  XP_024973293.1 219 II 220
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVVSKQNYED LRKQRLEENK RRMEELHLPQ LSQALKTAHS PKPSPMKRTK PRVIGTEMVE  60
VRRSSRVANK PAPVYKEIVV YERVDLPRSS RRYTYSRRDL ANRVYASDEA REYAINKADE  120
LEAMLEGGHP SFVKPMLQSH VTGGFWLGLP GHFCRKNLPK KDGTVTLIDE EGEEFPTVYL  180
AHKAGLSGGW RGFSISHGLV DGDALVFQQT KPTVFKVYII RCKDYQEGEK NDVSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-71B3 family protein