PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973393.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 265aa MW: 29060 Da PI: 6.4353

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121	4.2e-38	37	94	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++cprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGg +rknkk s XP_024973393.1 37 STHCPRCDSTHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNIPVGGLCRKNKKIS 94 578****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGSTSLQYPI DSTKPTDTMV PSSKVMNHGP HHMDHGSTHC PRCDSTHTKF CYYNNYSLSQ 60 PRYFCKSCRR YWTKGGTLRN IPVGGLCRKN KKISSTFKKP TTTNNHNTTT HHRQPQPSGM 120 SSNFMDLHSP VEFSVDPHFM FENLTNGSPA AIDFLESGGG CGGGEYDDQI VDDFPAMVVA 180 GGYGADMGNT HGSNPETISY DEYDHEYYES MMNGTDMKPS RVFTLGWQDQ AGSGCDSDLN 240 GSGEGRNGAS GYLMGFGSSW AGLMN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-33	Dof family protein