PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024973484.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 333aa    MW: 35952.6 Da    PI: 5.9998
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024973484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like955.7e-30165218155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_024973484.1 165 RPRLVWTPQLHKRFVDVVAHL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 218
                     59*******************.9*******************************8 PP
2Myb_DNA-binding48.42.2e-15167217148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_024973484.1 167 RLVWTPQLHKRFVDVVAHLGVKnaVPKTIMQLMNvEGLTRENVASHLQKYR 217
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGEEVRITEY DVRGGGGGGG GGGGGGGGGG EDDDRVFEWE AGLPNVDDLT PLSQSLISAE  60
LLSAFSITPQ PYRSMIDVNR ASQNTLSNMR GALEKQSSTK YNSFKSFSDD KGYDEMVVEG  120
EETADHGSDT RKLRRVDSGG DGGGAGEEAE SALLADDSSA RTSKRPRLVW TPQLHKRFVD  180
VVAHLGVKNA VPKTIMQLMN VEGLTRENVA SHLQKYRLYL KRMQGLSTQG PSSSDYLFAS  240
TPIPQNLQES GGGNGHRYAP GTTPVPYPAH MVPMPYPSPQ MVPNSAVGDG GAYHHGYESH  300
SYPYNMTMQQ RDWSGNKFAS VSAYQHRTTP NDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.22e-72G2-like family protein