PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024973486.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 323aa    MW: 35382.1 Da    PI: 5.9998
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024973486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.15.5e-30155208155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_024973486.1 155 RPRLVWTPQLHKRFVDVVAHL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 208
                     59*******************.9*******************************8 PP
2Myb_DNA-binding48.42.1e-15157207148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_024973486.1 157 RLVWTPQLHKRFVDVVAHLGVKnaVPKTIMQLMNvEGLTRENVASHLQKYR 207
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGEEVRITEY DVRGGGGGGG EDDDRVFEWE AGLPNVDDLT PLSQSLISAE LLSAFSITPQ  60
PYRSMIDVNR ASQNTLSNMR GALEKQSSTK YNSFKSFSDD KGYDEMVVEG EETADHGSDT  120
RKLRRVDSGG DGGGAGEEAE SALLADDSSA RTSKRPRLVW TPQLHKRFVD VVAHLGVKNA  180
VPKTIMQLMN VEGLTRENVA SHLQKYRLYL KRMQGLSTQG PSSSDYLFAS TPIPQNLQES  240
GGGNGHRYAP GTTPVPYPAH MVPMPYPSPQ MVPNSAVGDG GAYHHGYESH SYPYNMTMQQ  300
RDWSGNKFAS VSAYQHRTTP NDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.25e-74G2-like family protein