PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973487.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

G2-like

Protein Properties

Length: 257aa MW: 28972.9 Da PI: 9.9471

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.3	2.3e-30	12	66	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m++ gLt++hvkSHLQkYR+ XP_024973487.1 12 KERLKWTQELHDLFEKAVNQLGGPDRATPKGILKAMGITGLTIYHVKSHLQKYRM 66 68****************************************************8 PP
2	Myb_DNA-binding	60.4	4e-19	14	65	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++l+ +av+qlGg+ t+k I + mg +g+t +++ks++qky+ XP_024973487.1 14 RLKWTQELHDLFEKAVNQLGGPdraTPKGILKAMGiTGLTIYHVKSHLQKYR 65 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MGSARSDHGS GKERLKWTQE LHDLFEKAVN QLGGPDRATP KGILKAMGIT GLTIYHVKSH 60 LQKYRMSKFI PESSRRDKLE KRSIPEMFPN FGVTSGAQLN EALQMQMEVQ RRLSDQSEVQ 120 KNLKLKIEAQ SKFLEKLTEA HKTRPNIAKI SKIVTSPTSL PSLCDVSEST MKDFESDSEV 180 DTNETRYKQD LRNAKRGRVD HDDDFALTQR FKRTSLNTAS VLLPKGGNSF PPQDDIFPWG 240 LAFCQSPLIP ASFNSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-51	G2-like family protein