PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024973599.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 229aa MW: 23948.6 Da PI: 8.0354

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024973599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.1	9e-39	28	87	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++l+cprCdstntkfCyynny+ sqPr+fCkaCrryWt+GG+lr++PvGgg+rkn k+s XP_024973599.1 28 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDIPVGGGSRKNAKRS 87 57899***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MPSDSADHRR ITTGKHHHLG VAAPPPEPEH LPCPRCDSTN TKFCYYNNYN FSQPRHFCKA 60 CRRYWTHGGT LRDIPVGGGS RKNAKRSRPS TAVSSSHNIN SSAVSSGLDY CHILPTATVP 120 VFPFAGDHGG AAQFVGDVKP GVGMCGSFTS LLSNNQSPGL FGLGVGGFDQ ELSFGLGRTI 180 WPFSDGVGGG HSAAGGGSGN TWQLESGDGG GDCFVLPDLA ISTPGNGMK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	1e-45	Dof family protein