PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974148.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 405aa    MW: 45658.4 Da    PI: 4.4974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-1951100255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_024974148.1  51 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 100
                     789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MARKRKQAND HERIMSERNS DHPEENMTWD DMVKESAAAA ALGGPRRARK RFVGVRQRPS  60
GRWVAEIKDT IQKIRVWLGT FDTAEEAARA YDEAACLLRG ANTRTNFWPS SQSSSTTPAL  120
PSKITNLLLH RLKARNNSLA AAAAASSHHT QLTTGCHDDK KQHEEFRDDI GELPDTIFTD  180
FLNDPDEYIP ENYEILLTSS NDNYDNRNPL SSLPVKDDFD QLIAPDNLDN HDDHMASQCS  240
SDDTNNEGAM EEDEFEEEGS SDMGVIDFGF IDELGSSCNF SPFEIAQEIA SHELQEEVYN  300
TEGDEPLTIS EAMKRMKYER KYSASLYAFN GIPECLKLKL GLGRGIKSRE RSKMQRTIKE  360
LDKKADEESK KDVEEEAVIS STTNIIDGEL SLWSSLDLPT ICYVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-21ERF family protein