PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024974287.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 437aa MW: 48267.4 Da PI: 6.5555

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024974287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.3	1.8e-09	225	283	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ + l++e+ XP_024974287.1 225 KRAKRVLANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLILLQRDTSCLTAEN 283 9*****************************************99999988777777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEKDKSPNLG GSLLPPSGRH LVYSPPSGNN LSVKSEPSGS TTLPPIGPGS GTTEPVRFGG 60 QGSCDSSRFS HDVSRMPDNP PKTLGHRRAH SEILTLPDDI SFDSDLGVVG GFDGPSFSDE 120 TEEDLFSMYL DMDKFNSSSA TSTFQAGESS SSAVQVSAAL TSLPENLVPS SSERPRVRHQ 180 HSQSMDGFTT IKPEMLTSGP EETSPSDKKA ISAAKLAELA LVDPKRAKRV LANRQSAARS 240 KERKMRYIAE LERKVQTLQT EATSLSAQLI LLQRDTSCLT AENSELRVRL QTMEQQVHLQ 300 DALNDALKEE IQHLKALTGQ NLVNGGTMMN FPPSFGSNQQ FYPNNQAVHT MLTAQQFQQL 360 QIQSHKQQQQ FQQQQIQQLQ QQQLHHHQQQ QQQQQQLHHH QQEQHLSESG DLKTRSSMSS 420 LSLKEHGLDV NPHASND

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEKDKSPNLG GSLLPPSGRH LVYSPPSGNN LSVKSEPSGS TTLPPIGPGS GTTEPVRFGG  60
QGSCDSSRFS HDVSRMPDNP PKTLGHRRAH SEILTLPDDI SFDSDLGVVG GFDGPSFSDE  120
TEEDLFSMYL DMDKFNSSSA TSTFQAGESS SSAVQVSAAL TSLPENLVPS SSERPRVRHQ  180
HSQSMDGFTT IKPEMLTSGP EETSPSDKKA ISAAKLAELA LVDPKRAKRV LANRQSAARS  240
KERKMRYIAE LERKVQTLQT EATSLSAQLI LLQRDTSCLT AENSELRVRL QTMEQQVHLQ  300
DALNDALKEE IQHLKALTGQ NLVNGGTMMN FPPSFGSNQQ FYPNNQAVHT MLTAQQFQQL  360
QIQSHKQQQQ FQQQQIQQLQ QQQLHHHQQQ QQQQQQLHHH QQEQHLSESG DLKTRSSMSS  420
LSLKEHGLDV NPHASND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-154	bZIP family protein