PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024974449.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 231aa    MW: 26304.5 Da    PI: 6.7894
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024974449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.6e-1689139255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr ++ +g+++AeIrd + ng   r++lg+f++aeeAa  +++a+ +++g
  XP_024974449.1  89 RFIGVRERP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEEAALVYDQAAFSMRG 139
                     689***888.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MELPSPMSSY TSIEFSPLSL CSWDELLFSH HMISKFQIKE EEYIFSHDRN EDQYEHSFKT  60
GPNKTLHNDN ETLEVIAKPK EEPEVQKKRF IGVRERPWGK FAAEIRDSTR NGIRVWLGTF  120
DSAEEAALVY DQAAFSMRGS LAQLNFPMER VKESLKGKYY SCFKDGSSPA AAIKETHRVR  180
RISKSKRNSK LQVCSKTPVV FEDLGSDLLE QLLFTSESFS SSSSSSSSTC S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-46ERF family protein